USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q9BWF3 USC-OGP 2-DE database:  Q9BWF3 Q9BWF3 General information about the entry View entry in simple text format Entry name RBM4_HUMAN Primary accession number Q9BWF3 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog; Short=hLark; AltName: Full=RNA-binding motif protein 4; AltName: Full=RNA-binding motif protein 4a;. Gene name Name=RBM4 Synonyms=RBM4A Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1195: pI=6.77; Mw=40578 Cross-references UniProtKB/Swiss-Prot Q9BWF3; RBM4_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name RBM4_HUMAN Primary accession number Q9BWF3 Secondary accession number(s) B3KUN0 B4E1U0 E7EQS3 O02916 Q4VC48 Q6P1P2 Q8WU85 Sequence was last modified on  June 1, 2001 (version 1) Annotations were last modified on  March 15, 2017 (version 153) Name and origin of the protein Description RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog; Short=hLark; AltName: Full=RNA-binding motif protein 4; AltName: Full=RNA-binding motif protein 4a; Gene name Name=RBM4 Synonyms=RBM4A Encoded on Name=RBM4; Synonyms=RBM4A Keywords 3D-structure; Activator; Alternative splicing; Complete proteome; Cytoplasm; Differentiation; Metal-binding; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; RNA-binding; RNA-mediated gene silencing; Zinc; Zinc-finger. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL U89505; AAC51293.1; ALT_FRAME; mRNA EMBL AK097592; BAG53492.1; -; mRNA EMBL AK303984; BAG64902.1; -; mRNA EMBL AL832566; CAH10593.1; -; mRNA EMBL AP001157; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL BC000307; AAH00307.1; -; mRNA EMBL BC021120; AAH21120.1; -; mRNA EMBL BC032735; AAH32735.1; -; mRNA EMBL BC064960; AAH64960.1; -; mRNA CCDS CCDS41676.1; -. [Q9BWF3-1]; . CCDS CCDS55776.1; -. [Q9BWF3-3]; . CCDS CCDS55777.1; -. [Q9BWF3-4]; . RefSeq NP_001185772.1; NM_001198843.1. [Q9BWF3-3]; . RefSeq NP_001185773.1; NM_001198844.1. [Q9BWF3-4]; . RefSeq NP_002887.2; NM_002896.3. [Q9BWF3-1]; . UniGene Hs.523822; -; . UniGene Hs.728823; -; . PDB 2DNQ; NMR; -; A=1-77 PDBsum 2DNQ; -; . ProteinModelPortal Q9BWF3; -; . SMR Q9BWF3; -; . BioGrid 111871; 164; . DIP DIP-44199N; -; . IntAct Q9BWF3; 68; . MINT MINT-1187795; -; . STRING 9606.ENSP00000425446; -; . iPTMnet Q9BWF3; -; . PhosphoSitePlus Q9BWF3; -; . BioMuta RBM4; -; . DMDM 62511089; -; . EPD Q9BWF3; -; . MaxQB Q9BWF3; -; . PaxDb Q9BWF3; -; . PeptideAtlas Q9BWF3; -; . PRIDE Q9BWF3; -; . DNASU 5936; -; . Ensembl ENST00000310092; ENSP00000309166; ENSG00000173933. [Q9BWF3-1]; . Ensembl ENST00000396053; ENSP00000413497; ENSG00000173933. [Q9BWF3-4]; . Ensembl ENST00000398692; ENSP00000381680; ENSG00000173933. [Q9BWF3-3]; . Ensembl ENST00000408993; ENSP00000386561; ENSG00000173933. [Q9BWF3-1]; . Ensembl ENST00000409406; ENSP00000386894; ENSG00000173933. [Q9BWF3-1]; . Ensembl ENST00000483858; ENSP00000435821; ENSG00000173933. [Q9BWF3-2]; . Ensembl ENST00000530235; ENSP00000432150; ENSG00000173933. [Q9BWF3-3]; . Ensembl ENST00000532968; ENSP00000432020; ENSG00000173933. [Q9BWF3-2]; . GeneID 5936; -; . KEGG hsa:5936; -; . UCSC uc001oiv.4; human. [Q9BWF3-1]; . CTD 5936; -; . DisGeNET 5936; -; . GeneCards RBM4; -; . HGNC HGNC:9901; RBM4; . HPA HPA042174; -; . HPA HPA047849; -; . MIM 602571; gene; . neXtProt NX_Q9BWF3; -; . OpenTargets ENSG00000173933; -; . PharmGKB PA34266; -; . eggNOG KOG0109; Eukaryota; . eggNOG ENOG41105PP; LUCA; . GeneTree ENSGT00390000020883; -; . HOGENOM HOG000026790; -; . HOVERGEN HBG062217; -; . InParanoid Q9BWF3; -; . KO K13187; -; . OrthoDB EOG091G08PZ; -; . PhylomeDB Q9BWF3; -; . TreeFam TF320661; -; . Reactome R-HSA-1368108; BMAL1:CLOCK; NPAS2 activates circadian gene expression; . SIGNOR Q9BWF3; -; . ChiTaRS RBM4; human; . EvolutionaryTrace Q9BWF3; -; . GeneWiki RBM4; -; . GenomeRNAi 5936; -; . PRO PR:Q9BWF3; -; . Proteomes UP000005640; Chromosome 11; . Bgee ENSG00000173933; -; . CleanEx HS_RBM4; -; . ExpressionAtlas Q9BWF3; baseline and differential; . Genevisible Q9BWF3; HS; . GO GO:0005737; C:cytoplasm; IDA:UniProtKB; . GO GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0016607; C:nuclear speck; IDA:UniProtKB; . GO GO:0005730; C:nucleolus; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; IDA:UniProtKB; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0035198; F:miRNA binding; IDA:UniProtKB; . GO GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB; . GO GO:0003729; F:mRNA binding; IDA:UniProtKB; . GO GO:0000166; F:nucleotide binding; IEA:InterPro; . GO GO:0097157; F:pre-mRNA intronic binding; IDA:UniProtKB; . GO GO:0097158; F:pre-mRNA intronic pyrimidine-rich binding; IDA:UniProtKB; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0008270; F:zinc ion binding; IEA:InterPro; . GO GO:0002190; P:cap-independent translational initiation; IDA:UniProtKB; . GO GO:0030154; P:cell differentiation; IEA:UniProtKB-KW; . GO GO:0097167; P:circadian regulation of translation; ISS:UniProtKB; . GO GO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB; . GO GO:0002192; P:IRES-dependent translational initiation; IDA:UniProtKB; . GO GO:0035278; P:miRNA mediated inhibition of translation; IDA:UniProtKB; . GO GO:0006397; P:mRNA processing; IEA:UniProtKB-KW; . GO GO:0017148; P:negative regulation of translation; IDA:UniProtKB; . GO GO:0032055; P:negative regulation of translation in response to stress; IDA:UniProtKB; . GO GO:0045947; P:negative regulation of translational initiation; IDA:UniProtKB; . GO GO:0051149; P:positive regulation of muscle cell differentiation; IDA:UniProtKB; . GO GO:0000381; P:regulation of alternative mRNA splicing; via spliceosome; IDA:UniProtKB GO GO:0046822; P:regulation of nucleocytoplasmic transport; IDA:UniProtKB; . GO GO:0046685; P:response to arsenic-containing substance; IDA:UniProtKB; . GO GO:0006396; P:RNA processing; TAS:ProtInc; . GO GO:0008380; P:RNA splicing; IEA:UniProtKB-KW; . GO GO:0051403; P:stress-activated MAPK cascade; IDA:UniProtKB; . Gene3D 3.30.70.330; -; 2; . Gene3D 4.10.60.10; -; 1; . InterPro IPR012677; Nucleotide-bd_a/b_plait; . InterPro IPR000504; RRM_dom; . InterPro IPR001878; Znf_CCHC; . Pfam PF00076; RRM_1; 2; . Pfam PF00098; zf-CCHC; 1; . SMART SM00360; RRM; 2; . SMART SM00343; ZnF_C2HC; 1; . SUPFAM SSF54928; SSF54928; 2; . PROSITE PS50102; RRM; 2; . PROSITE PS50158; ZF_CCHC; 1; .

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